Please wait, while we are loading the content...
Please wait, while we are loading the content...
Content Provider | IEEE Xplore Digital Library |
---|---|
Author | Ying-Tung Hsiao Cheng-Long Chuang Joe-Air Jiang |
Copyright Year | 2005 |
Description | Author affiliation: Dept. of Electr. Eng., Tamkang Univ., Taipei (Ying-Tung Hsiao; Cheng-Long Chuang) |
Abstract | In this paper, a novel cut-strategy is presented for solving the problems of multiple biosequence alignment. Sequence comparison is the most important primitive operation for analyzing of the bioinformatics data. The most fundamental method for alignment of several biosequences is the dynamic programming (DP) technique. The DP method is capable of finding optimal alignments for a set of sequences. However, when the length of the sequences increased, the DP method is impracticable due to the computational complexity is extremely high. Therefore, a new method is proposed in this paper for reducing the computational cost of the DP technique. By recursively finding the structural features of the biosequences, the proposed method can divide the biosequences into very small alignment problem, which can be directly solved by DP, or other applicable methods that can produce the results of alignment faster. By utilizing the object-oriented programming technique, the proposed method also provides low memory space consumption during execution. Moreover, the proposed algorithm has been implemented in an x86 demonstration program, and compares the effective and efficient performance with other known method. |
Starting Page | 1 |
Ending Page | 6 |
File Size | 296730 |
Page Count | 6 |
File Format | |
ISBN | 0780393112 |
DOI | 10.1109/TENCON.2005.300956 |
Language | English |
Publisher | Institute of Electrical and Electronics Engineers, Inc. (IEEE) |
Publisher Date | 2005-11-21 |
Publisher Place | Australia |
Access Restriction | Subscribed |
Rights Holder | Institute of Electrical and Electronics Engineers, Inc. (IEEE) |
Subject Keyword | Sequences Bioinformatics Computational complexity Dynamic programming RNA Mechatronics Computational efficiency Object oriented programming Computational biology Biology computing dynamic programming bimolecular sequences multiple sequence alignment cut-strategy |
Content Type | Text |
Resource Type | Article |
National Digital Library of India (NDLI) is a virtual repository of learning resources which is not just a repository with search/browse facilities but provides a host of services for the learner community. It is sponsored and mentored by Ministry of Education, Government of India, through its National Mission on Education through Information and Communication Technology (NMEICT). Filtered and federated searching is employed to facilitate focused searching so that learners can find the right resource with least effort and in minimum time. NDLI provides user group-specific services such as Examination Preparatory for School and College students and job aspirants. Services for Researchers and general learners are also provided. NDLI is designed to hold content of any language and provides interface support for 10 most widely used Indian languages. It is built to provide support for all academic levels including researchers and life-long learners, all disciplines, all popular forms of access devices and differently-abled learners. It is designed to enable people to learn and prepare from best practices from all over the world and to facilitate researchers to perform inter-linked exploration from multiple sources. It is developed, operated and maintained from Indian Institute of Technology Kharagpur.
Learn more about this project from here.
NDLI is a conglomeration of freely available or institutionally contributed or donated or publisher managed contents. Almost all these contents are hosted and accessed from respective sources. The responsibility for authenticity, relevance, completeness, accuracy, reliability and suitability of these contents rests with the respective organization and NDLI has no responsibility or liability for these. Every effort is made to keep the NDLI portal up and running smoothly unless there are some unavoidable technical issues.
Ministry of Education, through its National Mission on Education through Information and Communication Technology (NMEICT), has sponsored and funded the National Digital Library of India (NDLI) project.
Sl. | Authority | Responsibilities | Communication Details |
---|---|---|---|
1 | Ministry of Education (GoI), Department of Higher Education |
Sanctioning Authority | https://www.education.gov.in/ict-initiatives |
2 | Indian Institute of Technology Kharagpur | Host Institute of the Project: The host institute of the project is responsible for providing infrastructure support and hosting the project | https://www.iitkgp.ac.in |
3 | National Digital Library of India Office, Indian Institute of Technology Kharagpur | The administrative and infrastructural headquarters of the project | Dr. B. Sutradhar bsutra@ndl.gov.in |
4 | Project PI / Joint PI | Principal Investigator and Joint Principal Investigators of the project |
Dr. B. Sutradhar bsutra@ndl.gov.in Prof. Saswat Chakrabarti will be added soon |
5 | Website/Portal (Helpdesk) | Queries regarding NDLI and its services | support@ndl.gov.in |
6 | Contents and Copyright Issues | Queries related to content curation and copyright issues | content@ndl.gov.in |
7 | National Digital Libarray of India Club (NDLI Club) | Queries related to NDLI Club formation, support, user awareness program, seminar/symposium, collaboration, social media, promotion, and outreach | clubsupport@ndl.gov.in |
8 | Digital Preservation Centre (DPC) | Assistance with digitizing and archiving copyright-free printed books | dpc@ndl.gov.in |
9 | IDR Setup or Support | Queries related to establishment and support of Institutional Digital Repository (IDR) and IDR workshops | idr@ndl.gov.in |
Loading...
|